Hey,
Thanks for the welcome and the great replys!
I'm the administrator on my computer and there are no other users.
It's a possibility that COMODO firewall is stopping CCleaner from uninstalling apps and removing from startup.
An AIO program I made that can remove items from startup is able to so it's either CCleaner isn't allowed access or there is a bug(doubt it).
Cheers for the help,
alien13